Hapi: an R package for chromosome-length haplotype inference using genotypic data of single gamete cells8 years ago
Introduction | Hapi package installation | Haplotype phasing module | Quick start (automatic phasing mode) | Haplotype phasing step by step | Data preprocessing | Convert genotype coding style | Filter out genotyping error | Select high-quality hetSNPs to form a framework | Imputation of missing data in the framework | Draft haplotype inference | Majority voting for draft haplotype inference | Proofreading of draft haplotypes | High-resolution haplotype assembly | Visualization of haplotypes in single gamete cells | Crossover analysis module | Identification of crossovers | Crossover visualization | Visualization of crossover resolution | Visualization of crossover distances | Visualization of crossover map | sessionInfo